Job Description P39364 Confidence 99.01% Date Thu Jan 5 11:59:55 GMT 2012 Rank 46 Aligned Residues 201 % Identity 15% Template c1znnF_ PDB info PDB header:biosynthetic protein Chain: F: PDB Molecule:plp synthase; PDBTitle: structure of the synthase subunit of plp synthase Resolution 2.20 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																			.	.	.														.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation																			.	.	.														.	.	.	.	.	.	.
Template Sequence		A	E	Q	A	K	I	A	E	A	A	G	A	V	A	V	M	A	.	.	.	L	E	G	G	V	A	R	M	A	D	P	T	V	.	.	.	.	.	.	.	I	E	E	V	M	N	A	V	S	I	P	V	M	A	K	V	R	I	G	H	Y	V	E	A	R	V	L	E	A	L	G	V	D	Y	I	D	E	S	E	V
Template Known Secondary structure											T	T		S					.	.	.								S						.	.	.	.	.	.	.									S	S								T	T											T	T		S						T	T
Template Predicted Secondary structure																			.	.	.														.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
					118			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.		.	.
Query SS confidence		.	.	.		.	.
Query Sequence		.	.	.	R	.	.	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T
Query Conservation		.	.	.		.	.
Alig confidence		.	.	.		.	.																															.	.	.	.	.	.	.																											.
Template Conservation																																						.	.	.	.	.	.	.																											.
Template Sequence		L	T	P	A	D	E	E	F	H	I	D	K	R	Q	F	T	V	P	F	V	C	G	C	R	D	L	G	E	A	A	R	R	I	A	E	G	.	.	.	.	.	.	.	A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	A	V	R	H	M	R	K	V	N	.	A	Q	I	R	K	V	V	N	M	S
Template Known Secondary structure		S			S		S	S					G	G	G		S	S							S	S										T	T	.	.	.	.	.	.	.		S								T	T	S	S														.									S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.																											.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.
		193	.	.									.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure					.	.	.	.	.	.	.	.																.											.												.
Query SS confidence					.	.	.	.	.	.	.	.																.											.												.
Query Sequence		A	G	T	.	.	.	.	.	.	.	.	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	.	D	T	V	V	L	A	N	T	G	V	.	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E
Query Conservation					.	.	.	.	.	.	.	.																.											.												.
Alig confidence					.	.	.	.	.	.	.	.																.											.												.														.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		E	D	E	L	V	A	E	A	K	Q	L	G	A	P	V	E	V	L	R	E	I	K	R	L	G	R	L	P	V	V	N	F	A	A	G	G	V	T	T	P	A	D	A	A	L	M	M	H	L	G	A	D	G	V	F	V	G	S	G	I	F	K	S	.	.	.	.	.	E	N	P	E	K	Y	A	R	A	I	V	E
Template Known Secondary structure		G	G	G									T													T	S		S	S						S	S			S										T	T		S						T					S	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.
		262	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	H	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	T	H	Y
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions