 |
Job Description | P39364 | Confidence | 80.21% | Date | Thu Jan 5 11:59:55 GMT 2012 |
Rank | 272 | Aligned Residues | 44 |
% Identity | 16% | Template | c1ytkA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase from thermoplasma |
PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase from2 thermoplasma acidophilum with nicotinate mononucleotide
|
Resolution | 2.65 Å |
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
. | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | A | L | L | K | R | V | K | E | T | V | . |
. |
. |
. |
. |
. |
P | D | T | V | V | L | A | N | T | G | V | C | L | E | N | V | E | E | Q | L | S | I | . |
A | D | G | C | V | T | A | T | T | F |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |   | . | . | . | . | . | . |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   | . |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|   |
|
Template Sequence |   |
N | F | E | A | L | I | R | E | V | R | W | E | L | A | L | R | G | R | S | D | I | K | I | M | V | S | G | G | L | D | E | N | T | V | K | K | L | R | E | A | G | A | E | A | F | G | V | G | T | S | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|