Job Description P39364 Confidence 98.44% Date Thu Jan 5 11:59:55 GMT 2012 Rank 62 Aligned Residues 177 % Identity 13% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E
Query Conservation
Alig confidence																						.	.	.	.	.	.	.																								.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																								.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	.	.	.	.	.	.	.	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	.	K	R	K	L	V	M	N	G	R	V	D	I	A	L	F	S	T	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													G	G	G		S					.	.	.	.	.	.	.			T	T	S															T	T			.	G	G	G					S							T	T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.																								.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S
Query Conservation
Alig confidence		.	.								.	.	.	.	.	.														.	.	.	.	.	.	.	.										.																					.	.	.	.	.	.	.	.	.
Template Conservation		.	.								.	.	.	.	.	.														.	.	.	.	.	.	.	.										.																					.	.	.	.	.	.	.	.	.
Template Sequence		.	.	H	R	V	Q	L	P	S	.	.	.	.	.	.	G	S	F	S	P	K	Q	I	R	A	R	F	P	.	.	.	.	.	.	.	.	H	L	H	I	G	R	S	V	H	.	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	.	.	.	.	.	.	.	.	.	V	F	R	G	V
Template Known Secondary structure		.	.							T	.	.	.	.	.	.	T	S											T	.	.	.	.	.	.	.	.	T									.	S										T	T		S							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.								.	.	.	.	.	.														.	.	.	.	.	.	.	.										.																					.	.	.	.	.	.	.	.	.
Template SS confidence
				74	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R
Query Conservation																																		.
Alig confidence												.																						.													.	.	.					.	.
Template Conservation												.																																			.	.	.					.	.
Template Sequence		S	L	L	S	D	I	K	Q	R	I	.	S	I	P	V	I	A	I	G	G	M	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	S	.	.	.	S	A	E	P	.	.	L	E	A	A	R	R	Y	S	R	K	L	K	E	M	R
Template Known Secondary structure												.		S						S	S			G	G	G							T	T		S					S					T	.	.	.	S	S	S		.	.
Template Predicted Secondary structure												.																																			.	.	.					.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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