Job Description P39364 Confidence 40.95% Date Thu Jan 5 11:59:55 GMT 2012 Rank 358 Aligned Residues 197 % Identity 9% Template c1telA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ribulose bisphosphate carboxylase, large subunit; PDBTitle: crystal structure of a rubisco-like protein from chlorobium2 tepidum Resolution 2.70 Å

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		4	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																			.	.	.
Query SS confidence								.																																																			.	.	.
Query Sequence		L	K	E	V	I	G	.	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	.	.	.	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M
Query Conservation								.																																																			.	.	.
Alig confidence								.										.	.	.	.	.	.	.	.																.	.	.	.											.	.			.	.	.										.	.
Template Conservation																		.	.	.	.	.	.	.	.																.	.	.	.											.	.															.	.
Template Sequence		L	R	D	I	L	N	A	H	G	R	P	I	F	F	G	V	.	.	.	.	.	.	.	.	V	K	P	N	I	G	L	S	P	G	E	F	A	E	I	.	.	.	.	A	Y	Q	S	W	L	G	G	L	D	.	.	I	A	K	D	D	E	M	L	A	D	V	T	W	S	.	.	S	I	E	E	R	A	A	H	L
Template Known Secondary structure							T			S	S							.	.	.	.	.	.	.	.		S	S		T	T										.	.	.	.								T		S	.	.						T	T		S	S	B	T	T	B	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																.	.	.	.											.	.															.	.
Template SS confidence
		1155	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170									.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.					.	.	.	.	1190	.	.	.	.	.			.	.	.	.	1200	.	.	.	.	.	.	.	.	.			1210	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure													.																																										.
Query SS confidence													.																																										.
Query Sequence		A	R	I	I	G	Q	L	M	S	D	I	.	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	.	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I
Query Conservation													.																																										.
Alig confidence													.																		.	.	.	.	.	.	.	.	.	.															.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	.	.	.	.	.	.	.	.	.	.	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	V	P	L	I	G	H	F
Template Known Secondary structure													S	S												G	G	G			.	.	.	.	.	.	.	.	.	.										T																					T	T		S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.											.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.			.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																												.	.	.	.	.				.	.
Query SS confidence													.	.	.	.	.	.																																												.	.	.	.	.				.	.
Query Sequence		V	P	E	A	A	V	Y	L	G	N	R	.	.	.	.	.	.	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	.	.	.	.	.	T	V	V	.	.	L	A	N	T	G	V	C	L	E	N
Query Conservation													.	.	.	.	.	.																																												.	.	.	.	.				.	.
Alig confidence													.	.	.	.	.	.											.	.	.	.																														.	.	.	.	.				.	.
Template Conservation																													.	.	.	.
Template Sequence		P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	.	.	.	.	L	D	A	V	I	M	P	G	F	G	D	R	M	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T
Template Known Secondary structure		T	T	T						S	T	T	S															T	.	.	.	.		S							S	S	S	S	S																S			T	T										S	S	B		T	T	T
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		1289	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.					.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.
		225	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	Q	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	T	V	Y	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1365	.	.	.	.	1370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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