Job Description P64426 Confidence 99.16% Date Thu Jan 5 12:08:13 GMT 2012 Rank 93 Aligned Residues 147 % Identity 18% Template d2d3na2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.					.	.	.																		.	.	.	.	.
Query SS confidence																																																	.	.	.	.					.	.	.																		.	.	.	.	.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	.	.	.	.	N	P	G	Y	.	.	.	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	.	.	.	.	.
Query Conservation																																																	.	.	.	.					.	.	.																		.	.	.	.	.
Alig confidence																																																	.	.	.	.					.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		N	R	L	N	S	D	A	S	N	L	K	S	K	G	I	T	A	V	W	I	P	P	A	W	K	G	A	S	Q	N	D	V	G	Y	G	A	Y	D	L	Y	D	L	G	E	F	N	Q	K	G	T	V	R	T	K	Y	G	T	R	S	Q	L	Q	A	A	V	T	S	L	K	N	N	G	I	Q	V	Y	G	D	V	V
Template Known Secondary structure															T										S			S	S	T	T			S		S				T	T		S	S		S		B	T	T	B	S	S	B	T	T	B															T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
																																																						157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	N	H	K	G	G	A	D	A	T	E	M	V	R	A	V	E	V	N	P	N	N	R	N	Q	E	V	T	G	E	Y	T	I	E	A	W	T	R	F	D	F	P	G	R	G	N	T	H	S	S	F	K	W	R	W	Y	H	F	D	G	V	D	W	D	Q	S	R	R	L	N	N	R	I	Y	K	F	R	G	H	G
Template Known Secondary structure			S				S		S												T	T							S											B			T	T	T	T	T	S	S					B		G	G	G					S			T	T	T			S	S							S	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		P	A	S	V	Y	V	Q	H	R	D	W	I	.	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		K	A	W	D	W	E	V	D	T	E	N	G	N	Y	D	Y	L	M	Y	A	D	I	D	M	D	H	P	E	V	V	N	E	L	R	N	W	G	V	W	Y	T	N	T	L	G	L	D	G	F	R	I	D
Template Known Secondary structure						S	S				T	T	S						S	S					T	T																				T		S					T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions