Return to main results Retrieve Phyre Job Id

Job DescriptionP64426
Confidence98.87%DateThu Jan 5 12:08:13 GMT 2012
Rank111Aligned Residues159
% Identity19%Templated1zy9a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases YicI catalytic domain-like
Resolution2.34

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100......... 110.........120.........130.........140.........150.........160.....
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Query Sequence  QAMIDKLDHLQRLGINTVFFQ. . . VKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRV
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Template Sequence  EETLKNLKLAKNFPFEVFQIDDAYEKDIGDWLVTRGDFP. . . . . . . . . . . . . . . S. VEEXAKVIAENGFIPGIWTAPFSV
Template Known Secondary structure  GGGTT
S
TTSTT
TT

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.TT

TT
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   200.........210.........220.........230........ . 240.........250.........260...
 
   166...170.........180.........190.........200.. .......210.........220.........230...
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Query Sequence  SVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDR. . . . . . . . . . . . FVLDPGIPEVQDWITSIVAEVVSRYPVDGVQ
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Template Sequence  SETS. . . . . . . . . . . . . . . . . DVFNEHPDWVVKENGEPKXAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRK. XGYRYFK
Template Known Secondary structure  TT
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GGGB
TT
TTB
TT
.TT

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   234.....240.........250.........260.........270.........280.........290.........
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Query Sequence  FDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAGVW
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Template Sequence  IDFLFAGAVPGERKKNITP. . . . . . . . . . . . . . . . . . IQAFRKGIETIRKAVGEDSFILGCGSPLL
Template Known Secondary structure 

GGGGG
SSB
SSS

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TTS
S

SG
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   326...330.........340.... .....350.........360.........370...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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