Return to main results Retrieve Phyre Job Id

Job DescriptionP64426
Confidence97.58%DateThu Jan 5 12:08:13 GMT 2012
Rank205Aligned Residues265
% Identity12%Templated1w32a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  QAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVN
Query Conservation        

 
   
 


  


  






   
 
  


  
  
  


   
 











 
       
Alig confidence 









....





.....














.........






















........
Template Conservation            ....

  
 ..... 
  

  

  
  .........     
  
  
   

 
 

 ........
Template Sequence  SARQNIVRAE. . . . FNQITA. . . . . ENIMKMSYMYSGSNF. . . . . . . . . SFTNSDRLVSWAAQNGQTVHGHA. . . . . . . .
Template Known Secondary structure  ....
S.....SSTTSGGGGTT.........

TT
........
Template Predicted Secondary structure  ....

.....












.........



........
Template SS confidence 















































































   27..30...... ...40.. .......50....... ..60.........70.........80
 
   169170.........180.........190.........200.........210.........220.........230.........240........
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  TKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFDDYFYTESPGSRLN
Query Conservation                                      


  



  
   
 


  









 


        
Alig confidence  ........................























































Template Conservation  ........................
 
      
 
               
  
  

 
 
  


 


        
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . LVWHPSYQLPNWASDSNANFRQDFARHIDTVAAHFAGQVKSWDVVNEALFDSADDP
Template Known Secondary structure  ........................


GGG

TT
STT
TTTTTT
S

B

GGG
T
Template Predicted Secondary structure  ........................





























Template SS confidence 















































































   81........90.........100.........110.........120.........130......
 
   249250.........260.........270.........280.........290.........300.........310.........320........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  DNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWV
Query Conservation 
   
  
  
      


  
  

  
   

  

 
   


 
   
    
 

       
     
   
 
Alig confidence 



...













































............














Template Conservation      ...                   
  
   

   
 
 
  
       ............          
  
 
Template Sequence  DGRG. . . SANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEEN. . . . . . . . . . . . GAKTTALVNLVQRLL
Template Known Secondary structure  T


...TT

TST
TTSSSTTS
............S
Template Predicted Secondary structure 



...






















............


Template SS confidence 















































































   137..140 .........150.........160.........170.........180...... ...190.........200.
 
   329330.. .......340...... ...350.........360......... 370.........380.........390.........400..
Predicted Secondary structure 


.






.








....
















Query SS confidence 



.













.






















. . . .
































Query Sequence  EQGL. LDYIAPQIYWPFSR. SAARYDVLAKWWADVVKPTRTRL. . . . YIGIAFYKVGEPSKIEPDWMINGGVPELKKQLD
Query Conservation    
 .

 
 

 
     .           
          
....
 
   
                   

  

 
Alig confidence 



.













.






















....
































Template Conservation    
  




 
 
              
      
  


 


  
                             

 
Template Sequence  NNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKA
Template Known Secondary structure  TT





SSSS
TT
SS
S

TTSS
SSS


SGGGGSS

Template Predicted Secondary structure 








































Template SS confidence 















































































   202.......210.........220.........230.........240.........250.........260.........270.........280.
 
   403 ......410........
Predicted Secondary structure  ..........





Query SS confidence 
. . . . . . . . . .














Query Sequence  L. . . . . . . . . . NDAVPEISGTILFRE
Query Conservation   .......... 
      
   
  
Alig confidence 
..........














Template Conservation                   
 
   
  
Template Sequence  RYKEIVQAYLEVVPPGRRGGITVWGI
Template Known Secondary structure  S
TT
S
S
Template Predicted Secondary structure 






Template SS confidence 

























   282.......290.........300.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions