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Job DescriptionP64426
Confidence97.19%DateThu Jan 5 12:08:13 GMT 2012
Rank230Aligned Residues210
% Identity17%Templated1ta3b_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  GYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWIT
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Template Sequence  GWSGADYLVDYATQHNKKVRGHTL. . . . . . . . . . . . . . . . . . . . . . . . . VWHSQLPSWVSS. . . . . . . IGDANTLRSVMT
Template Known Secondary structure 

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   5960.........70.........80.. .......90.... .....100......
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  SIVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAG
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Template Sequence  NHINEVVGRYKGKIMHWDVVNEIFNEDGTFRNSVFYNLLGE. . . . . . . . . . . . . . DFVRIAFETARAADPDAKLYINDYN
Template Known Secondary structure  TTTS
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B
TTSSB


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   107..110.........120.........130.........140....... ..150.........160.........170..
 
   298.300.........310.........320.........330. ........340...... ...350.........360.........370.....
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Query Sequence  VWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQG. LLDYIAPQIYWPFSR. SAARYDVLAKWWADVVKPTRTRLYIGIAF
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Template Sequence  LD. . . . . . . . . . . SASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLA. . . NTGVSEVAIT. . .
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   173. .....180.........190.........200.........210.........220..... ....230.....
 
   376...380.........390.........400.........410.........420
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Query Sequence  YKVGEPSKIEPDWMINGGVPELKKQLDLNDAVPEISGTILFREDY
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Template Sequence  . ELDIAGAA. . . . . . . . . SSDYLNLLNACLNEQKCVGITVWGVSD
Template Known Secondary structure  .TT

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TTS
SBG
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   236...240... ......250.........260.........270
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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