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Job DescriptionP64426
Confidence92.81%DateThu Jan 5 12:08:13 GMT 2012
Rank275Aligned Residues260
% Identity14%Templated1r85a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  HLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIRE
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Template Sequence  QMLKRHFNSIVAE. . . . . NVMKPISIQPEEGKF. . . . . . . . NFEQADRIVKFAKANGMDIRFHTLVWHSQVPQWFFLDKE
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SS.....STTS
SBTTB
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GGGGB
TT
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   46...50........ .60.........70... ......80.........90.........100.........110..
 
   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  LNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKY
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Template Sequence  GKPMVNETDPVKREQNKQ. . . . . . . . . . . . . . . . LLLKRLETHIKTIVERYKDDIKYWDVVNEVVGDDGKLRNSPWYQIA
Template Known Secondary structure  SSBGGG


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   113......120.........130 .........140.........150.........160.........170......
 
   257..260.........270.........280..... ....290.........300.........310.........320.........330.. ..
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Query Sequence  GGAFASKADWRRNNTQQLIAKVSHTIKSI. KPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGL. LD
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Template Sequence  GID. . . . . . . . . . . . . . YIKVAFQAARKYGGDNIKLYMNDYN. . . . . . . . . . . . . TEVEPKRTALYNLVKQLKEEGVPID
Template Known Secondary structure  TT..............
TTSS
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   177.. 180.........190.........200.... .....210.........220.........
 
   335....340...... ...350.........360.........370.........380.........390.........400......
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Query Sequence  YIAPQIYWPFSR. SAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMINGGVPELKKQLDLNDA. . . . . . .
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Template Sequence  GIGHQSHIQIGWPSEAEIEKTINMFAAL. . . . GLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEK
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SSSS
T....T

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   230.........240.........250....... ..260.........270.........280.........290.........300.....
 
   407..410......
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Query Sequence  . VPEISGTILF
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Template Sequence  LSDKISNVTFW
Template Known Secondary structure  TGGGS
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   306...310......
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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