Job Description P64426 Confidence 97.60% Date Thu Jan 5 12:08:13 GMT 2012 Rank 204 Aligned Residues 184 % Identity 14% Template d1r46a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.25

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		W	L	A	T	V	S	R	L	D	W	P	P	V	S	S	V	N	I	S	N	P	T	S	R	A	R	V	Q	Q	Q	A	M	I	D	K	L	D	H	.	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G
Query Conservation																																								.
Alig confidence																				.	.	.	.	.																.												.	.	.	.	.	.																								.
Template Conservation																				.	.	.	.	.																												.	.	.	.	.	.																								.
Template Sequence		W	E	R	F	M	C	N	L	D	C	Q	E	E	P	D	S	C	I	.	.	.	.	.	S	E	K	L	F	M	E	M	A	E	L	M	V	S	E	G	W	K	D	A	G	Y	E	Y	L	C	I	.	.	.	.	.	.	D	D	C	W	M	A	P	Q	R	D	S	E	G	R	L	Q	A	D	P	Q	R	F	P	.
Template Known Secondary structure						T	T				T	T	T		T	T	T	S		.	.	.	.	.	S														T	T					T							.	.	.	.	.	.		S	S		B		S	S			T	T	S				B		T	T	T		T	.
Template Predicted Secondary structure																				.	.	.	.	.																												.	.	.	.	.	.																								.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S
Query Conservation
Alig confidence		.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	H	G	I	R	Q	L	A	N	Y	V	H	S	K	G	L	K	L	G	I	Y	A	D	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	T	C	A	G	F	P	G	S	F	G	Y	Y	D	I
Template Known Secondary structure		.	T												T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	B		T	T	S	S	B			T	T	T
Template Predicted Secondary structure		.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																																								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V
Query Conservation
Alig confidence									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		D	A	Q	T	F	A	D	.	W	G	V	D	L	L	K	F	D	G	C	Y	C	D	S	L	E	N	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	Y	K	H	M	S	L	A	L	N	R	T	G	R	S	I	V	Y	S	C	E	W	.	P	L
Template Known Secondary structure									.		T										S		S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S									.
Template Predicted Secondary structure									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		155	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																											.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	N	R	S	H	D	P	L	G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	M	W	P	F	Q	K	P	N	Y	T	E	I	R	Q	Y	C	N	H	W	R	N	F	A	D
Template Known Secondary structure				T	T	T	S								T	T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions