Job Description P64426 Confidence 99.14% Date Thu Jan 5 12:08:13 GMT 2012 Rank 96 Aligned Residues 133 % Identity 20% Template d1mxga2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																				.	.	.	.	.	.				140	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	N	P	G	Y	.	.	.	D	P	L	Q	F	M	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	I	R	S	K	I	P	E	W	Y	E	A	G	I	S	A	I	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	P	S	K	G	M	S	G	G	Y	S	M	G	Y	D	P	Y	D	Y	F	D	L	G	E	Y	Y	Q	K	G	T	V	E	T	R	F	G	S	K	E	E	L	V	R	L	I
Template Known Secondary structure															T							.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			T	T	G	G	G			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.															.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		147	.	.	150	.	.	.	.	.	.													.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		D	E	A	H	K	R	G	M	K	V	.	.	.	.	.	.	.	.	.	.	.	.	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	.	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.																																											.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		Q	T	A	H	A	Y	G	I	K	V	I	A	D	V	V	I	N	H	R	A	G	G	D	L	E	W	N	P	F	V	G	D	Y	T	W	T	D	F	S	K	V	A	S	G	K	Y	T	A	N	Y	L	D	F	H	P	N	E	L	H	C	C	D	E	G	T	F	G	G	F	P	D	I	C	H	H	K	E	W	D	Q
Template Known Secondary structure							T	T										S	B										T	T	T	T								T	T		T	T			S				G	G	G	B	S	S	S	S	S		S			S				T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		214	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		D	W	I	.	.	.	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		Y	W	L	W	K	S	N	E	S	Y	A	A	Y	L	R	S	I	G	F	D	G	W	R	F	D
Template Known Secondary structure					T	S	S	T	T	S								T	T							T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions