Job Description P64426 Confidence 99.38% Date Thu Jan 5 12:08:13 GMT 2012 Rank 37 Aligned Residues 192 % Identity 19% Template d1m53a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.20

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	.	.	.	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V
Query Conservation																																																					.	.	.
Alig confidence																						.	.	.	.	.	.																										.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		R	G	I	I	E	K	L	D	Y	L	K	S	L	G	I	D	A	I	W	I	.	.	.	.	.	.	N	P	H	Y	D	S	P	N	T	D	N	G	Y	D	I	S	N	Y	R	Q	I	M	K	E	Y	G	T	M	E	D	F	D	S	L	V	A	E	M	K	K	R	N	M	R	L	M	I	D	V	V	I	N	H	T
Template Known Secondary structure							T								T							.	.	.	.	.	.									T	T	T	T	S	S		S							G	G	G																T	T										S	B
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		166	.	.																		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Query Sequence		S	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	.	.	.	.	.	.	.	.	.	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	Q	H	P	W	F	I	Q	S	K	S	D	K	N	N	P	Y	R	D	Y	Y	F	W	R	D	G	K	D	N	Q	P	P	N	N	Y	P	S	F	F	G	G	S	A	W	Q	K	D	A	K	S	G	Q	Y	Y	L	H	Y	F	A	R	Q	Q	P	D	L	N	W	D	N	P	K	V	R	E	D	L	Y	A	M
Template Known Secondary structure			T	T	S										T	T		T	T	G	G	G	B						S	S	S	S		S	S			B		T	T	S	S	B	S					T	T	T							S	S		T	T			B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	.	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G
Query Conservation																				.
Alig confidence							.													.																													.	.	.	.	.
Template Conservation							.																																										.	.	.	.	.
Template Sequence		L	R	F	W	L	.	D	K	G	V	S	G	M	R	F	D	T	V	A	T	Y	S	K	I	P	G	F	P	N	L	T	P	E	Q	Q	K	N	F	A	E	Q	Y	T	M	G	P	N	.	.	.	.	.	I	H	R	Y	I	Q	E	M	N	R	K	V	L	S	R	Y	D	V	A	T	A	G
Template Known Secondary structure							.	T	T	T							T	T	G	G	G	S	S			T	T											T					T	T			T	T	.	.	.	.	.												T	G	G	G	S
Template Predicted Secondary structure							.																																										.	.	.	.	.
Template SS confidence
		227	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions