Job Description P64426 Confidence 98.86% Date Thu Jan 5 12:08:13 GMT 2012 Rank 113 Aligned Residues 190 % Identity 14% Template d1kwga2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V
Query Conservation
Alig confidence																												.	.	.	.	.	.											.	.	.	.	.	.	.	.																													.	.
Template Conservation																												.	.	.	.	.	.											.	.	.	.	.	.	.	.																													.	.
Template Sequence		K	E	R	W	K	E	D	A	R	R	M	R	E	A	G	L	S	H	V	R	I	G	E	F	A	W	.	.	.	.	.	.	A	L	L	E	P	E	P	G	R	L	.	.	.	.	.	.	.	.	E	W	G	W	L	D	E	A	I	A	T	L	A	A	E	G	L	K	V	V	L	G	T	P	T	A	T	P	.	.
Template Known Secondary structure																T								T	T			.	.	.	.	.	.					S	B	T	T	B		.	.	.	.	.	.	.	.														T	T	T								S	T	T	S		.	.
Template Predicted Secondary structure																												.	.	.	.	.	.											.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																					.										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	P	K	W	L	V	D	R	Y	P	E	I	L	P	V	D	R	E	G	R	R	R	R	F	G	G	R	R	H	Y	C	F	S	S	P	V	Y	R	E	E	A	R	R	I	V	T	L	L	A	E	R	Y	G	.	G	L	E	A	V	A	G	F	Q	T	D	N	E	Y	G	C	H	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									G	G	G	S		B		T	T	S		B			S	S	S	S					T	T																				T	.	T		T	T							S	S	S	T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																					.
Template SS confidence
											77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
																																									239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	R	C	Y	C	P	R	C	Q	E	A	F	R	G	W	L	E	A	R	Y	G	T	I	E	A	L	N	E	A	W	G	T	A	F	W	S	Q	R	Y	R	S	F	A	E	V	E	L	P	H	L	T	V	A	E	P	N	P	S	H	L	L	D	Y	Y	R	F	A	S	D	Q	V	R	A	F	N	R	L	Q	V
Template Known Secondary structure		T	S				S																S	S									T	T	T	G	G	G				S	S	G	G	G				S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	L	R	A	H	A	P	G	K	F	V	T	H	N	F	M	G	F	F	T	D	L	D
Template Known Secondary structure								S	T	T									T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions