Job Description P64426 Confidence 98.98% Date Thu Jan 5 12:08:13 GMT 2012 Rank 106 Aligned Residues 138 % Identity 15% Template d1jaea2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																			.	.	.				.	.	.	.	.	.
Query SS confidence									.																			.	.	.				.	.	.	.	.	.
Query Sequence		Q	A	M	I	D	K	L	.	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	.	.	.	G	T	A	.	.	.	.	.	.	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A
Query Conservation									.																			.	.	.				.	.	.	.	.	.
Alig confidence									.																			.	.	.				.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.
Template Sequence		N	D	I	A	D	E	C	E	R	F	L	Q	P	Q	G	F	G	G	V	Q	I	S	P	P	N	E	Y	L	V	A	D	G	R	P	W	W	E	R	Y	Q	P	V	S	Y	I	I	N	T	R	S	G	D	E	.	.	.	.	.	.	.	.	S	A	F	T	D	M	T	R	R	C	N	D	A	G	V	R	I	Y	V
Template Known Secondary structure											T	T	T	T	T	T										S		B	B			T	T			G	G	G	G	G	S	B			S		S			T	T				.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.									.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	V	I	N	H	M	T	G	M	N	G	V	G	T	S	G	S	S	A	D	H	D	G	M	N	Y	P	A	V	P	Y	G	S	G	D	F	H	S	P	C	E	V	N	N	Y	Q	D	A	D	N	V	R	N	C	E	L	V	G	L	R	D	L	N	Q	G	S	D	Y	V	R	G	V	L	I	D	Y	M	N	H
Template Known Secondary structure						S	B			S	S				B	T	T	S				B	T	T	T	T	B	B	T	T	T	T	B		G	G	G	B					B				T	T								S	B	B	T	T	B		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	S	R	Y	P	V	D	G	V	Q	F	D
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		M	I	.	D	L	G	V	A	G	F	R	V	D
Template Known Secondary structure				.		T	T							T
Template Predicted Secondary structure				.
Template SS confidence
		174	.		.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions