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Job DescriptionP64426
Confidence99.49%DateThu Jan 5 12:08:13 GMT 2012
Rank9Aligned Residues169
% Identity18%Templated1j0ha3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  QAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVN
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Template Sequence  QGIIDHLDYLVDLGITGIYLTPIFRSPSN. . HKYDTAD. . YFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYE
Template Known Secondary structure  TT





SSS..S

S
S..
TTT

TT


SB

TT
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   176...180.........190.........200.... .....210. ........220.........230.........240.........250.
 
   169170.........180.........190.........200.........210.........220.........230........
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Query Sequence  . . . . . . . . . . TKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFDDYF
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Template Sequence  FAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVAN
Template Known Secondary structure 
GGG
TTGGGB
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SSS
SB
BSTT
TTSBBB
TTS


TTGG
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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   239240.........250.........260.........270.........280.........290.
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Query Sequence  YTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEF
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Template Sequence  EID. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HEFWREFRQEVKALKPDVYI
Template Known Secondary structure  GS
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TT
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   332.. .....340.........350....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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