Return to main results Retrieve Phyre Job Id

Job DescriptionP64426
Confidence99.18%DateThu Jan 5 12:08:13 GMT 2012
Rank92Aligned Residues148
% Identity10%Templated1hx0a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.38

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110.........120.........130......... 140.........150.........160...
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Query Sequence  QQQAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGY. . . DPLQFMLDEAHKRGMKVHAWFNPY
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Template Sequence  WVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNVGVRIYVDAVIN
Template Known Secondary structure  TTTTTT




S
BB

TTTTS
GGGGGSBS
S
S
BTTB
TT


S
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   164.....170.........180.........190.........200.... .....210.......
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Query Sequence  RVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFV. . . . . . . . . . . . . . . . . . . . . . . . . . LDPGIPEVQDWIT
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Template Sequence  HMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDCQLVGLLDLALEKDYVRSMIA
Template Known Secondary structure  TT


BS
BSS


BBGGGTBBTTTTB
GGGB
TTT

STTSB


TT
SBGGGB
TTS
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   218.220.........230.....
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Query Sequence  SIVAEVVSRYPVDGVQFD
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Template Sequence  DYLNKLI. DIGVAGFRID
Template Known Secondary structure  .T

T
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   181...... ..190.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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