Return to main results Retrieve Phyre Job Id

Job DescriptionP64426
Confidence30.97%DateThu Jan 5 12:08:13 GMT 2012
Rank384Aligned Residues228
% Identity11%Templated1g01a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100 .........110.........120.........130.........140.........150.........160.........170
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Query Sequence  IDKLDHLQR. LGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTK
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Template Sequence  ENAFVALSNDWGSNMIRLAMYIG. . . . . . . . . . . . . . . ENGYATNPEVKDLVYEGIELAFEHDMYVIVDW. . . . . . . . . .
Template Known Secondary structure  TTS

SSS...............SSSTTT
TTTT
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   276...280.........290........ .300.........310.........320.........330
 
   171........180.........190.........200.........210.........220....... ..230.........240......
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Query Sequence  PGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRY. . . . PVDGVQFDDYFYTESPGSR
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Template Sequence  . . . . . . . . . . . . . . . . HVHAPGD. . . . . . . . . . . . . . PRADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNG
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SSS
..............TTSGGGTTTT
TTGGG

S


S

TT
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   331...... ..340.........350.........360.........370.........380
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
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Query Sequence  LNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRR
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Template Sequence  . . . . . . . . . . . GPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNP. . . . . . . . . . . . . . . . . . . . . . . NWSQRPDL
Template Known Secondary structure  ...........S



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   381........390.........400.........410........ .420......
 
   327..330.........340.........350. ........360.........370.........380.........390.
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Query Sequence  WVEQGLLDYIAPQIYWPFSRSAARY. . . . . . . . . . . . . . . DVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMIN
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Template Sequence  SADNPIDA. . . ENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAVFAT. . . . . . . EWGTSQANGDGG
Template Known Secondary structure  S

SS...SSTTTS







TT

GGG


TT

.......SSBTTTBS
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   427..430.... .....440.........450.........460.........470.........480.... .....490......
 
   392.......400.........410.........420
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Query Sequence  GGVPELKKQLDLNDAVPEISGTILFREDY
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Template Sequence  PYFDEADVWLNFLNKHN. . ISWANWSLTN
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   497..500.........510... ......520...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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