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Job DescriptionP64426
Confidence70.72%DateThu Jan 5 12:08:13 GMT 2012
Rank330Aligned Residues162
% Identity17%Templated1bhga3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.53

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  QQAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSV
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Template Sequence  WPLLVKDFNLLRWLGANAF. . . . . . . . . . . . . . . . . . . . . . . . . . . . RTSHYPYAEEVMQMCDRYGIVV. . IDECPGVGL
Template Known Secondary structure  T

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TTS

SSTSTT

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T
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   363......370.........380. ........390.........400... ......410..
 
   168.170.........180.........190.........200.........210.........220....... ..230.........240......
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Query Sequence  NTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRY. PVDGVQFDDYFYTESPGSR
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Template Sequence  ALPQF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHL.
Template Known Secondary structure  TSSGG...................................GSTT
SSS

TTS.
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   413.... ..420.........430.........440.........450......
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
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Query Sequence  LNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . ESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPY. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ......................TT

SS
B


TTT
SSGGG...................
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   457..460.........470.........480.........490.....
 
   327..330.........340.........350.........360..
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Query Sequence  WVEQGLLDYIAPQIYWPFSRSAARYDVLAKWWADVV
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Template Sequence  . . . . . . VDVICLNSYYSWYHDYGHLELIQLQLATQF
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TTSSSSTT
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   496...500.........510.........520.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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