Return to main results Retrieve Phyre Job Id

Job DescriptionP64426
Confidence99.43%DateThu Jan 5 12:08:13 GMT 2012
Rank17Aligned Residues140
% Identity16%Templated1avaa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130....... .. 140.........150.........160....
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Query Sequence  QAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENP. GY. . . DPLQFMLDEAHKRGMKVHAWFNPYR
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Template Sequence  NFLMGKVDDIAAAGITHVWLP. . . . . . PASQSV. AEQGYMPGRLYDLDASKYGNKAQLKSLIGALHGKGVKAIADIVINH
Template Known Secondary structure  TTT


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BS.STTSSSB

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   20.........30.........40 ...... ...50.........60.........70.........80.........90..
 
   165... .170.........180.........190.........200.........210.........220........
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Query Sequence  VSVN. . . . . . . . . . . . . . . . TKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYP
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Template Sequence  RTAEHKDGRGIYCIFEGGTPDARLDWGPHMICRDDRPYADGTGNPDTGADFGAAPDIDHLNLRVQKELVEWLNWLKADIG
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TTT

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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   229230.....
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Query Sequence  VDGVQFD
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Template Sequence  FDGWRFD
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T
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   173......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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