 |
Job Description | P64426 | Confidence | 46.53% | Date | Thu Jan 5 12:08:13 GMT 2012 |
Rank | 359 | Aligned Residues | 54 |
% Identity | 19% | Template | c3rlgA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:sphingomyelin phosphodiesterase d lisictox-alphaia1a; |
PDBTitle: crystal structure of loxosceles intermedia phospholipase d isoform 12 h12a mutant
|
Resolution | 1.60 Å |
|
 |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | D | K | L | D | H | L | Q | R | L | G | I | N | T | V | F | F | Q | V | K | P | D | G | T | A | L | W | P | S | K | I | L | P | W | S | D | L | M | T | G | K | I | G | E | N | P | G | Y | D | P | L | Q | F | M | L | D | E | A | H | K | R | G | M | K | V | H | A | W |
Query Conservation |   |
  |   |   |   |
|
|   |
|   |   |   |
|   |
|
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
Template Sequence |   |
I | G | D | V | G | K | A | Y | K | K | A | G | I | T | G | H | I | W | Q | S | D | G | I | T | N | C | L | P | R | G | L | S | R | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | A | A | V | A | N | R | D | S | A | N | G | F | I | N | K | V | Y | Y | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
| B |  |  |  |  |  |
|
| T | T | S |
|
|
| S |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T | S | T | T |
|
|
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|