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Job DescriptionP64426
Confidence98.49%DateThu Jan 5 12:08:13 GMT 2012
Rank136Aligned Residues209
% Identity12%Templatec3nsnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:n-acetylglucosaminidase; PDBTitle: crystal structure of insect beta-n-acetyl-d-hexosaminidase ofhex12 complexed with tmg-chitotriomycin
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100.........110.........120.........130......... 140...
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Query Sequence  DWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGY. . . . DPLQ
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Template Sequence  DKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTFHWHITDSQSFPFVTTKRPN. . . LYKFGALSPQKVYTKAAIR
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SSST...SSSSSS
B
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   205....210.........220.........230.........240.........250.........260.. .......270.........280.
 
   144.....150.........160.........170.........180.........190.........200.... .....210.........220.
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Query Sequence  FMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFV. . LDPGIPEVQDWITSIVA
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Template Sequence  EVVRFGLERGVRVLPEF. . . . . . . . . . . DAPAHVGEGWQDTDLTVCFKAEPWKSYCVEPPCGQLNPTKDELYQYLEDIYS
Template Known Secondary structure  TT
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SSGGGT
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T
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   282.......290........ .300.........310.........320.........330.........340.........350
 
   222....... 230.........240.........250.........260.........270.........280..... ....290.
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Query Sequence  EVVSRYPV. DGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSI. . . KPGVEF
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Template Sequence  DMAEVFDTTDIFHMGGDEVSEACWNSSDSIQNFMMQNRWDLDKESFLKL. WNYFQQKAQDKAYKAFGKKLPLIL
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   351........360.........370.........380.........390......... 400.........410.........420...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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