 |
Job Description | P64426 | Confidence | 97.20% | Date | Thu Jan 5 12:08:13 GMT 2012 |
Rank | 229 | Aligned Residues | 132 |
% Identity | 12% | Template | c3ffjA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:glycosyl hydrolase (family 31); |
PDBTitle: the crystal structure of the glycosyl hydrolase (family 31) from2 ruminococcus obeum atcc 29174
|
Resolution | 1.94 Å |
|
 |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | A | M | I | D | K | L | D | H | L | Q | R | L | G | I | N | T | V | F | F | Q | V | K | P | D | G | T | A | L | W | P | S | K | I | L | P | W | S | D | L | M | T | G | K | I | G | E | N | P | G | Y | D | P | L | Q | F | M | L | D | E | A | H | K | R | G | M | K | V | H | A | W | F | N | P | Y | R | V | S | V |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
| . | . |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
Template Sequence |   |
K | E | D | F | R | A | V | A | K | G | Y | R | E | N | H | I | P | . |
. |
I | D | X | I | Y | X | D | I | D | Y | X | Q | D | F | K | D | F | T | V | N | E | K | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
F | P | D | F | P | E | F | V | K | E | X | K | D | Q | E | L | R | L | I | P | I | I | D | A | G | V | K | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . |
|
|  |  |  |  |
| G | G | G | S | S | T | T |
| T | T |
|
|
| T | T | T | . | . | . | . | . | . | . | . | . |
| T | T |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  | S |
|  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
  |
  |   |
168 | |
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | . |
. |
T | K | P | G | T | I | R | E | L | N | S | T | L | S | Q | Q | P | A | S | V | Y | V | Q | H | R | D | W | I | R | T | S | G | D | R | F | V | L | D | P | G | I | P | E | V | Q | D | W | I | T | S | I | V | A | E | V | V | S | R | Y | P | V | D | G | V | Q | F | D |
Query Conservation |   |
  | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   | . | . | . | . |   |
|   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   | . |   |
|
|
|
|   |
|   |
|
Template Sequence |   |
K | G | Y | E | V | Y | E | E | G | V | K | N | N | Y | F | C | K | R | E | D | G | S | D | F | V | A | A | . |
. |
. |
. |
V | W | P | G | D | T | H | F | P | D | X | L | N | P | E | A | R | K | W | F | G | D | K | Y | R | F | L | I | D | . |
Q | G | I | E | G | F | W | N | D |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  |  |  | T | T |
| B |
| B |
| T | T | S |
| B |
|
|  |  | . | . | . | . |  | T | T |  |  |  |  |
| B |
| T | T | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | . | T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
|
|
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | |
. | 300 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|