Job Description P64426 Confidence 97.55% Date Thu Jan 5 12:08:13 GMT 2012 Rank 207 Aligned Residues 251 % Identity 14% Template c3emzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-xylanase; PDBTitle: crystal structure of xylanase xynb from paenibacillus2 barcinonensis complexed with a conduramine derivative Resolution 2.08 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R
Query Conservation
Alig confidence													.	.	.	.	.																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	F	I	A	K	H	Y	N	S	V	.	.	.	.	.	T	A	E	N	Q	M	K	F	E	E	V	H	P	R	E	H	E	Y	.	.	.	.	.	.	.	.	T	F	E	A	A	D	E	I	V	D	F	A	V	A	R	G	I	G	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S			.	.	.	.	.			S	S	T	T	S						S	B	T	T	B		.	.	.	.	.	.	.	.														T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	.	.	E	S	P	G	S	R	L	N	D	N	E	T	Y
Query Conservation																																																																			.	.
Alig confidence		.	.	.	.	.	.	.	.																									.	.																																.	.
Template Conservation		.	.	.	.	.	.	.	.																									.	.
Template Sequence		.	.	.	.	.	.	.	.	H	T	L	V	W	H	N	Q	T	P	A	W	M	F	E	D	A	S	G	G	T	A	S	R	.	.	E	M	M	L	S	R	L	K	Q	H	I	D	T	V	V	G	R	Y	K	D	Q	I	Y	A	W	D	V	V	N	E	A	I	E	D	K	T	D	L	I	M	R	D	T	K	W	L
Template Known Secondary structure		.	.	.	.	.	.	.	.			S	B		S	S	S			G	G	G	G	B		T	T	S	S	B				.	.																		T	T	T	T		S									B		S	S	T	T			B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																									.	.
Template SS confidence
										81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S	H	D	P	L	G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A	D	T	R	R	W	V	E	Q	G	.	L
Query Conservation																																																																																.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	L	V	Q	A	F	N	M	A	H	E	A	D	P	N	A	L	L	F	Y	N	D	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	D	P	V	K	R	E	K	I	Y	N	L	V	R	S	L	L	D	Q	G	A	P
Template Known Secondary structure				T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														T	T	S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S																		T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.															.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180														.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																	.																																																												.	.	.	.	.
Query SS confidence																	.																																																												.	.	.	.	.
Query Sequence		L	D	Y	I	A	P	Q	I	Y	W	P	F	S	R	S	.	A	A	R	Y	D	V	L	A	K	W	W	A	D	V	V	K	P	T	R	T	R	L	Y	I	G	I	A	F	Y	K	V	G	E	P	S	K	I	E	P	D	W	M	I	N	G	G	V	P	E	L	K	K	Q	L	D	L	N	D	A	.	.	.	.	.
Query Conservation																	.																																																												.	.	.	.	.
Alig confidence																	.															.	.	.	.													.																													.	.	.	.	.
Template Conservation																																.	.	.	.													.
Template Sequence		V	H	G	I	G	M	Q	G	H	W	N	I	H	G	P	S	M	D	E	I	R	Q	A	I	E	R	Y	A	S	L	.	.	.	.	D	V	Q	L	H	V	T	E	L	D	L	S	.	V	F	R	H	E	D	Q	R	T	D	L	T	E	P	T	A	E	M	A	E	L	Q	Q	K	R	Y	E	D	I	F	G	L	F
Template Known Secondary structure													T	T	B	S														T	T	.	.	.	.	S												.	S	S		T	T							S	S
Template Predicted Secondary structure																																.	.	.	.													.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
					407	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	V	P	E	I	S	G	T	I	L	F	R	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		R	E	Y	R	S	N	I	T	S	V	T	F	W	G	V
Template Known Secondary structure				T	T	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions