Job Description P64426 Confidence 98.97% Date Thu Jan 5 12:08:13 GMT 2012 Rank 107 Aligned Residues 223 % Identity 16% Template c3cz8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative sporulation-specific glycosylase ydhd; PDBTitle: crystal structure of putative sporulation-specific glycosylase ydhd2 from bacillus subtilis Resolution 2.20 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S
Query Conservation
Alig confidence																								.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	I	S	I	F	E	Y	H	I	A	P	N	G	D	I	A	N	Q	L	N	D	.	A	A	A	I	E	T	T	W	Q	R	R	V	T	P	L	A	T	I	T	N	L	T	S	G	G	F	S	T	E	I	V	H	Q	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											B		T	T	S		B					S		.										T	T												T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	N	N	P	T	A	R	T	N	L	V	N	N	I	Y	D	L	V	S	T	R	G	Y	G	G	V	T	I	D	F	.	E	Q	V	S	A	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	L	F	T	G	F	L	R	Q	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	T																				T		S							.		S			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.																								.	220	.	.	.	.	.	.	.	.	.	230
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350				.
Predicted Secondary structure																																																																.	.	.	.	.										.	.	.
Query SS confidence																																																																.	.	.	.	.										.	.	.
Query Sequence		H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S	H	D	P	L	G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A	D	T	R	R	W	V	E	Q	G	L	L	D	Y	I	A	P	Q	I	Y	.	.	.	.	.	W	P	F	S	R	S	A	A	R	.	.	.	Y
Query Conservation																																																																.	.	.	.	.										.	.	.
Alig confidence																		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.										.	.	.
Template Conservation																		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	L	Q	A	G	G	Y	V	L	T	I	A	V	P	A	.	.	K	T	S	D	N	I	P	W	L	R	G	Y	D	Y	G	G	I	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	Y	M	F	I	M	A	Y	D	W	H	H	A	G	S	E	P	G	P	V	A	P	I	T	E	I
Template Known Secondary structure							T	T										.	.		S		S			G	G	G	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S									S	S		T	T	S		S			S	S
Template Predicted Secondary structure																		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.																.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.																												.	380	.	.	.	.	.	.	.																	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	L	A	K	W	W	A	D	V	V	K	P	T	R	T	R	L	Y	I	G	I	A	F	Y	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	P	S	K	I	E	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		R	R	T	I	E	F	T	I	A	Q	V	P	S	R	.	.	K	I	I	I	G	V	P	L	Y	G	Y	D	W	I	I	P	Y	Q	P	G	T	V	A	S	A	I	S	N	Q	N	A	I	E	R	A	M	R	Y	Q	A	P	I	Q	Y	S	A	E	Y	Q	S	P	F	F	R	Y	S	D	Q	Q	G	R	T	H	E
Template Known Secondary structure									T	T	T	S		G	G	.	.	G							S							S	S			T	T																		T	T							T	T	T	T									T	T	S
Template Predicted Secondary structure																.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	N	G	G	V	P	E	L	K	K	Q	L	D	L	N	D	A	V	P	E	I	S	G	T	I	L	F	R
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		V	W	F	E	G	V	R	S	M	S	R	K	M	Q	I	V	R	E	Y	R	.	L	Q	A	I	G	A	W	Q
Template Known Secondary structure																				T	T	.		S
Template Predicted Secondary structure																						.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions