Job Description P64426 Confidence 89.38% Date Thu Jan 5 12:08:13 GMT 2012 Rank 287 Aligned Residues 230 % Identity 10% Template c3clwF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from bacteroides2 fragilis Resolution 2.20 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																						.																							.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.																						.																							.	.	.	.	.
Query Sequence		S	R	A	R	V	Q	Q	Q	A	M	I	D	K	L	D	H	L	.	.	.	.	.	.	.	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	.	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	.	.	.	.	.	L	Q	F	M	L	D	E
Query Conservation																			.	.	.	.	.	.	.																						.																							.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																						.																							.	.	.	.	.
Template Conservation
Template Sequence		W	P	Q	E	K	K	E	K	I	A	D	L	L	F	K	R	E	F	D	E	K	G	N	P	I	G	M	A	L	T	N	W	R	V	N	I	G	A	G	S	Y	E	N	R	E	A	K	E	V	D	N	S	W	N	R	T	E	C	F	L	S	P	D	G	K	Y	D	F	T	K	Q	A	G	Q	Q	W	F	M	K	A
Template Known Secondary structure		S																	B		T	T	S		B		S				S									S	T	T	T	T	T	T	S	S			S	S	S	T	T					S	B		T	T	S		B		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		149	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		A	H	K	R	G	.	.	.	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S
Query Conservation							.	.	.
Alig confidence							.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	E	R	G	M	N	N	F	L	F	F	T	N	S	A	P	Y	F	M	T	R	S	A	S	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	D	Q	D	C	I	N	L	Q	N	D	K	F	D	D	F	A	R	F	L	V	K	S	A	Q
Template Known Secondary structure					T	T									S	S			G	G	G	S	S	S	S	S	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S	S	S		S	S		T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																												.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S	H	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		H	F	R	E	Q	G	F	H	V	N	Y	I	S	P	N	N	E	P	N	G	Q	W	.	.	.	.	.	.	.	.	H	A	N	S	F	Q	E	G	S	F	A	T	K	A	D	L	Y	R	M	V	E	E	L	D	K	A	I	S	E	A	Q	I	D	T	K	I	L	I	P	E	V	G	D	M	K	Y	L	F	E	I
Template Known Secondary structure						T	T										S		T	T	S		G	.	.	.	.	.	.	.	.	G	G			S	S		B																							T		S									S	S	G	G	G	G	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		P	L	G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A	D	T	R	R	W	V	E	Q	.	.	G	L	L	D	Y	I	A	P	Q	I	Y	W	P	F	S	R
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		D	S	I	A	K	T	P	D	D	I	I	H	S	M	F	Y	K	D	G	Q	Y	S	V	L	K	F	K	N	L	F	N	C	V	A	A	H	D	Y	W	S	A	Y	P
Template Known Secondary structure			S		T	T	S										S	T	T	S	T	T			T	T		T	T										T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions