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Job DescriptionP64426
Confidence97.73%DateThu Jan 5 12:08:13 GMT 2012
Rank196Aligned Residues145
% Identity15%Templatec3a5vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of alpha-galactosidase i from mortierella vinacea
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90....... ..100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RARVQQQAMIDKLDH. LQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFN
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Template Sequence  DEQLILDAAKAIASSGLKDLGYNYVII. . . . . . DDCWQKNERESSKTLLADPTKFP. . RGIKPLVDDIHNLGLKAGIYSS
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T..T
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   24.....30.........40.........50 .........60.........70... ......80.........90.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  PYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFDDYFYTE
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Template Sequence  A. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTLTCGGHIASLGYEDIDAKTWAK. WGIDYLKYDNCYNQG
Template Known Secondary structure  S.......................................SSB
TTS
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   96 ...100.........110.........120 .........130.....
 
   242.......250.........260.........270.........280.........290.......
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Query Sequence  SPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAG
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Template Sequence  QSGTPKLSYDRYK. . . . . . . . . . . . . . . . . . . . . . AMGNALNKTGRPMLYSLCNWG
Template Known Secondary structure 

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   136...140........ .150.........160.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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