Job Description P64426 Confidence 94.00% Date Thu Jan 5 12:08:13 GMT 2012 Rank 269 Aligned Residues 142 % Identity 15% Template c2x2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:alpha-1,4-glucan lyase isozyme 1; PDBTitle: crystal structure of the gracilariopsis lemaneiformis alpha-2 1,4-glucan lyase with acarbose Resolution 2.60 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																	.	.																																							.
Query SS confidence																	.	.																																							.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	.	.	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	.	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V
Query Conservation																	.	.																																							.
Alig confidence																	.	.								.	.	.	.																												.
Template Conservation																										.	.	.	.
Template Sequence		I	S	V	E	E	I	V	E	G	Y	Q	N	N	N	F	P	F	E	G	L	A	V	D	V	.	.	.	.	D	M	Q	D	N	L	R	V	F	T	T	K	G	E	F	W	T	A	N	R	V	G	T	G	G	D	P	N	N	R	S	V	F	E	W	A	H	D	K	G	L	V	C	Q	T	N	I	T	C	F	L	R
Template Known Secondary structure													T	T	T										G	.	.	.	.	G	G	S	B	T	T	B	T	T				G	G	G	B	T	T	S	S				S			T	T	S		B							T	T	T									S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	Q	H	R	D	W	I	R	T	S	G	.	.	.	.	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																										.
Template Conservation																																																																																	.
Template Sequence		N	D	N	E	G	Q	D	Y	E	V	N	Q	T	L	R	E	R	Q	L	Y	T	K	N	D	S	L	T	G	T	D	F	G	M	T	D	D	G	P	S	D	A	Y	I	G	H	L	D	Y	G	G	G	V	E	C	D	A	L	F	P	D	W	G	R	P	D	V	A	E	W	W	G	N	N	Y	K	K	L	F	S	.
Template Known Secondary structure					T	T												T	T		B					B	T	T								S	S	S		T	T	S								S	T	T								B		T	T	S	T	T									T					T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
		227	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	V	D	G	V	Q	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	L	D	F	V	W	Q	D
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		545	.	.	.	.	550	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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