Job Description P64426 Confidence 99.36% Date Thu Jan 5 12:08:13 GMT 2012 Rank 44 Aligned Residues 143 % Identity 13% Template c2qpuB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-amylase type a isozyme; PDBTitle: sugar tongs mutant s378p in complex with acarbose Resolution 1.70 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	.	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.																	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		N	M	M	M	G	K	V	D	D	I	A	A	A	G	V	T	H	V	W	L	P	P	P	S	H	S	.	.	.	.	V	S	N	E	G	Y	M	P	G	R	L	Y	D	I	D	A	S	K	Y	G	N	A	A	E	L	K	S	L	I	G	A	L	H	G	K	G	V	Q	A	I	A	D	I	V	I	N	H	R	C	A
Template Known Secondary structure					G	G	G							T	T										S		B	.	.	.	.	S	S	T	T	S		S	B			T	T		G	G	G		S	S																T	T										S	B
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
			157	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure		.					.	.	.	.
Query SS confidence		.					.	.	.	.
Query Sequence		.	H	A	W	F	.	.	.	.	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G
Query Conservation		.					.	.	.	.
Alig confidence		.					.	.	.	.
Template Conservation
Template Sequence		D	Y	K	D	S	R	G	I	Y	C	I	F	E	G	G	T	S	D	G	R	L	D	W	G	P	H	M	I	C	R	D	D	T	K	Y	S	D	G	T	A	N	L	D	T	G	A	D	F	A	A	A	P	D	I	D	H	L	N	D	R	V	Q	R	E	L	K	E	W	L	L	W	L	K	S	D	L	G	F	D	A
Template Known Secondary structure		S				T	T	S								S	S	S	S		T	T				G	G	G	B		T	T		T	T	T			S		S				S	S				T	T	S		B	B		T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		232	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	L	D
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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