Job Description P64426 Confidence 97.27% Date Thu Jan 5 12:08:13 GMT 2012 Rank 223 Aligned Residues 265 % Identity 14% Template c2oylB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:endoglycoceramidase ii; PDBTitle: endo-glycoceramidase ii from rhodococcus sp.: cellobiose-like2 imidazole complex Resolution 1.80 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P
Query Conservation
Alig confidence																									.	.														.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.														.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	L	A	R	E	Y	A	D	M	G	T	N	F	V	R	F	L	I	S	W	R	S	.	.	V	E	P	A	P	G	V	Y	D	Q	Q	Y	L	.	.	.	.	.	.	.	.	.	.	D	R	V	E	D	R	V	G	W	Y	A	E	R	G	Y	K	V	M	.	.	.	.	.	.	.	.	.	.	.	.	L	D
Template Known Secondary structure																									.	.			S	B	T	T	B							.	.	.	.	.	.	.	.	.	.													T	T					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.														.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.											.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	H	Q	D	V	Y	S	G	A	I	T	P	G	A	G	A	I	G	N	G	A	P	A	W	A	T	Y	M	D	G	L	P	V	E	P	Q	P	R	W	E	L	Y	Y	I	Q	P	G	V	M	R	A	F	D	N	F	W	N	T	T	G	K	H	P	E	L	V	E	H	Y	A	K	A	W	R	A	V	A	D	R	F
Template Known Secondary structure					B	S	S		G	G	G						S	S	S	B	S	S		G	G	G				T	T							S	S	G	G	G	G	G	G	S											T	T	S	S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S	H	D	P	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	N	D	A	V	V	A	Y	D	L	M	N	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	G	S	L	Q	G	P	A	F	E	A	G	P	L	A	A	M	Y	Q	R	T	T	D	A	I	R	Q	V	D	Q	D	T	W	V	C	V	A	P	Q	A	I	G	V	N	Q	G	L	P	S	G
Template Known Secondary structure		T	T		T	T								S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			T					T	T														T	T	T		S	S	S								S	T	T	G	G	G	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.															.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.										360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.
Query Sequence		G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A	D	T	R	R	W	V	E	Q	G	L	L	D	Y	I	A	P	Q	I	Y	W	P	F	S	R	S	A	A	R	Y	D	V	L	A	K	W	W	A	.	.	.	.	.	.	.	.	.	D	V	V	K	P	T	R	T	R	L	Y	I	G	I	A	F	Y	K	V
Query Conservation																																																						.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	K	I	D	D	P	R	A	G	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	A	Y	C	P	H	L	Y	P	L	P	L	D	H	E	G	L	A	R	T	L	T	D	V	T	I	D	A	W	R	A	N	T	A	H	T	A	R	V	L	G	D	V	P	I	I	L	G	E	F	G	L	D	T
Template Known Secondary structure									S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.							B				G	G	G																												T	T	S			B				B					T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.														.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	P	S	K	I	E	P	D	W	M	I	N	G	G	V	P	E	L	K	K	Q	L	D	L	N	D	A	V	P	E	I	S	G	T	I	L	F	R	E	D
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		T	L	P	G	A	.	.	.	.	.	.	.	.	.	.	R	D	Y	I	E	R	V	Y	G	T	A	R	E	M	G	.	.	A	G	V	S	Y	W	S	S	D
Template Known Secondary structure		T	S	T	T		.	.	.	.	.	.	.	.	.	.															T	.	.						S			S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		357	.	.	360	.											.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions