Job Description P64426 Confidence 97.72% Date Thu Jan 5 12:08:13 GMT 2012 Rank 197 Aligned Residues 217 % Identity 15% Template c2dskA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:chitinase; PDBTitle: crystal structure of catalytic domain of hyperthermophilic chitinase2 from pyrococcus furiosus Resolution 1.50 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		K	L	D	H	L	Q	R	L	G	I	N	T	V	.	.	.	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K
Query Conservation															.	.	.
Alig confidence															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	E	Y	A	K	L	T	G	T	K	Y	F	T	L	A	F	I	L	Y	S	S	V	Y	N	G	P	A	W	A	G	S	I	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	F	V	D	E	V	R	E	L	R	E	I	G	G	E	V	I	I	A	F	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S		S											T	T	T	T					T	T	T	B		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G									T	T	T								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.															.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.						.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.						.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	V	G	P	Y	L	C	Q	Q	A	S	T	P	E	Q	L	A	E	W	Y	I	K	V	I	D	T	Y	N	A	T	Y	L	D	F	D	I	.	E	A	G	I	D	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S									S	S																T		S							.		S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.						.	.	.	.	.	.	.	.
Template SS confidence
																														488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S	H	D	P	L	G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A	D	T	R	R	W	V	E	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	K	L	A	D	A	L	L	I	V	Q	R	E	R	P	W	V	K	F	S	F	T	L	P	S	D	P	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	G	G	Y	G	I	I	E	T	M	A	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	T	T											T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560																			.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		331	.		.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.											.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure				.										.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence				.										.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	.	L	D	Y	I	A	P	Q	I	Y	.	.	.	.	.	W	P	F	S	R	S	A	A	R	Y	D	V	L	A	K	W	W	A	D	V	V	K	P	T	.	.	.	.	.	.	.	.	.	.	R	T	R	L	Y	I	G	I	A	F	Y	K	V	G	E	P	S	K	I	E	P	D	W	M	I	N	G	G	V
Query Conservation				.										.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence				.										.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	R	V	D	R	V	N	P	M	T	M	D	Y	Y	W	T	P	S	N	A	E	N	A	I	K	V	A	E	N	V	F	R	Q	L	K	Q	I	Y	P	E	K	S	D	E	E	I	W	K	M	I	G	L	T	P	M	I	G	V	N	D	D	K	S	.	.	.	.	.	.	.	.	.	.	.	.	V	F	T	L
Template Known Secondary structure		T														S	S	S			S																				T	T	S									B			B		B					T	T	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.													640	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	K	K	Q	L	D	L	N	D	A	V	P	E	I	S	G	T	I	L	F	R	E	D
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		E	D	A	Q	Q	L	V	D	W	A	I	Q	H	K	.	I	G	S	L	A	F	W	S	V	D
Template Known Secondary structure														T	T	.		S					B		G	G
Template Predicted Secondary structure																.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.		.	.	660	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions