Job Description P64426 Confidence 97.00% Date Thu Jan 5 12:08:13 GMT 2012 Rank 238 Aligned Residues 264 % Identity 12% Template c2depA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:thermostable celloxylanase; PDBTitle: crystal structure of xylanase b from clostridium2 stercorarium f9 Resolution 1.80 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I
Query Conservation
Alig confidence																.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		I	A	E	L	Y	K	K	H	V	N	M	L	V	A	.	.	.	.	.	E	N	A	M	K	P	A	S	L	Q	P	T	E	G	N	F	.	.	.	.	.	.	.	.	Q	W	A	D	A	D	R	I	V	Q	F	A	K	E	N	G	M	E	L	R	F	H	T	L	V	W	H	N	Q	T	P	D	W	F	F	L	D
Template Known Secondary structure											S					.	.	.	.	.	S	S	T	T	S						S	B	T	T	B		.	.	.	.	.	.	.	.															T	T											S	S	S			G	G	G	G	B
Template Predicted Secondary structure																.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	R	Y	.	.	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T
Query Conservation																																																							.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	G	K	P	M	V	E	E	T	D	P	Q	K	R	E	E	N	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	L	Q	R	L	E	N	Y	I	R	A	V	V	L	R	Y	K	D	D	I	K	S	W	D	V	V	N	E	V	I	E	P	N	D	P	G	G	M	R	N	S	P	W
Template Known Secondary structure		T	T	S	S	B	G	G	G													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	T											B		T	T	S	G	G	G	B
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	.	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S	H	D	P	L	G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A	D	T	R	R	W	V	E	Q	G
Query Conservation																																		.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.												.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	I	T	G	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	E	V	A	F	R	A	T	R	E	A	G	G	S	D	I	K	L	Y	I	N	D	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	D	P	V	K	R	D	I	L	Y	E	L	V	K	N	L	L	E	K	G
Template Known Secondary structure						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S	S							S		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S																	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.															.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.														.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
			332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure		.																																																																												.	.	.	.
Query SS confidence		.																																																																												.	.	.	.
Query Sequence		.	L	L	D	Y	I	A	P	Q	I	Y	W	P	F	S	R	S	A	A	R	Y	D	V	L	A	K	W	W	A	D	V	V	K	P	T	R	T	R	L	Y	I	G	I	A	F	Y	K	V	G	E	P	S	K	I	E	P	D	W	M	I	N	G	G	V	P	E	L	K	K	Q	L	D	L	N	D	A	.	.	.	.
Query Conservation		.																																																																												.	.	.	.
Alig confidence		.																		.	.	.																																.																								.	.	.	.
Template Conservation																				.	.	.																																.
Template Sequence		V	P	I	D	G	V	G	H	Q	T	H	I	D	I	Y	N	P	P	.	.	.	V	E	R	I	I	E	S	I	K	K	F	A	G	L	G	L	D	N	I	I	T	E	L	D	M	S	I	Y	S	W	N	.	D	R	S	D	Y	G	D	S	I	P	D	Y	I	L	T	L	Q	A	K	R	Y	Q	E	L	F	D	A
Template Known Secondary structure															S	S		S		.	.	.													T	T	T												S	S		T	T	.							S
Template Predicted Secondary structure																				.	.	.																																.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
						407	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	V	P	E	I	S	G	T	I	L	F	R	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		L	K	E	N	K	D	I	V	S	A	V	V	F	W	G	I
Template Known Secondary structure				T	T	G	G	G							S		S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions