Job Description P64426 Confidence 99.28% Date Thu Jan 5 12:08:13 GMT 2012 Rank 70 Aligned Residues 174 % Identity 22% Template c1wzaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase a; PDBTitle: crystal structure of alpha-amylase from h.orenii Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.										.	.	.																																																.
Query SS confidence														.	.	.	.	.	.	.	.										.	.	.																																																.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	.	.	.	.	.	.	.	.	L	G	I	N	T	V	F	F	Q	.	.	.	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	.
Query Conservation														.	.	.	.	.	.	.	.										.	.	.																																																.
Alig confidence														.	.	.	.	.	.	.	.										.	.	.																								.	.	.	.	.	.	.																		.
Template Conservation																																																									.	.	.	.	.	.	.
Template Sequence		K	G	I	I	E	K	L	D	Y	L	N	D	G	D	P	E	T	I	A	D	L	G	V	N	G	I	W	L	M	P	I	F	K	S	P	S	Y	H	G	Y	D	V	T	D	Y	Y	K	I	N	P	D	Y	G	T	L	.	.	.	.	.	.	.	E	D	F	H	K	L	V	E	A	A	H	Q	R	G	I	K	V	I
Template Known Secondary structure							T							S		T	T			S	S				S											S	S	S	S			S		S							G	G	G				.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
													157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	.	.	.	.	.	.	.	.	.	L	D	P	G	I	P	E	V	Q	D	W	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	L	P	I	N	H	T	S	E	R	H	P	W	F	L	K	A	S	R	D	K	N	S	E	Y	R	D	Y	Y	V	W	A	G	P	D	T	D	T	K	E	T	K	L	D	G	G	R	V	W	H	Y	S	P	T	G	M	Y	Y	G	Y	F	W	S	G	M	P	D	L	N	Y	N	N	P	E	V	Q	E	K	V
Template Known Secondary structure							S	B			T	T	S								T		T	T		T	T	G	G	G	B		B			S						B		S	S	S		B		S					T	T						S	S		T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G
Query Conservation
Alig confidence										.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	I	A	K	Y	W	L	.	K	Q	G	V	D	G	F	R	L	D	G	A	M	H	I	F	P	P	A	Q	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	F	T	W	W	E	K	F	R	Q	E	I	E	E	V	K	P	V	Y	L	V	G
Template Known Secondary structure										.		T	T											T	T	S		G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T	S
Template Predicted Secondary structure										.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.																							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions