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Job DescriptionP64426
Confidence99.43%DateThu Jan 5 12:08:13 GMT 2012
Rank19Aligned Residues181
% Identity18%Templatec1jgiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of the active site mutant glu328gln of2 amylosucrase from neisseria polysaccharea in complex with3 the natural substrate sucrose
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130......... 140.........150...... ..
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Query Sequence  QAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGY. . . DPLQFMLDEAHKRGMKV. . . . . . . HA
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Template Sequence  KGLKDKIPYFQELGLTYLYLMPLFK. . . . CPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHT
Template Known Secondary structure  TT
S


B
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SS
STTTTS
S
SSSB
TTT

TT


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   113......120.........130....... ..140.........150.........160.........170.........180........
 
   159160.........170.........180.........190.... .....200.........210......
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Query Sequence  . . . . . . . . . . . . . . . . . . . WFNPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRD. . . WIRTSGDRFVLDPGIPEVQDWI
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Template Sequence  SNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAM
Template Known Secondary structure  TTST
GGGTTSB
SSSTS


S
TTT
STT
TTS

SS
TTB
TTS
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   189190.........200.........210.........220.........230.........240.........250.........260........
 
   217..220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  TSIVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEF
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Template Sequence  AGEMLFLA. NLGVDILRMDAVAFIWKQMGTSCENLP. . . . . . . . . . . . . . . . . QAHALIRAFNAVMRIAAPAVFF
Template Known Secondary structure  .TTT

TGGGS


TTS
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   269270...... ...280.........290.........300... ......310.........320.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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