Return to main results Retrieve Phyre Job Id

Job DescriptionP64426
Confidence99.35%DateThu Jan 5 12:08:13 GMT 2012
Rank48Aligned Residues139
% Identity18%Templatec1jdaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:1,4-alpha maltotetrahydrolase; PDBTitle: maltotetraose-forming exo-amylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.... .....120.........130.........140.........150.....
Predicted Secondary structure 





.............


























Query SS confidence 

























. . . . . . . . . . . . .








































Query Sequence  QAMIDKLDHLQRLGINTVFFQVKPDG. . . . . . . . . . . . . TALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMK
Query Conservation        

 
   
 


  


  
.............





   
 
  


  
  
  


   
 







Alig confidence 

























.............
















........















Template Conservation    
  

  
  







 
                



   

 

   

 ........ 


 

  

 



Template Sequence  NILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSD. . . . . . . . AQLRQAASALGGAGVK
Template Known Secondary structure  TT
S


S




B
SSS

B

SSTT


S


SSS

........TT
Template Predicted Secondary structure 




































........


Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.. .......100........
 
   156...160.........170.........180.........190.........200.... .....210.........220.........230
Predicted Secondary structure 


































.....







Query SS confidence 
















































. . . . .

























Query Sequence  VHAWFNPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFV. . . . . LDPGIPEVQDWITSIVAEVVSRYPVD
Query Conservation 



 
                                           .....


  



  
   
 


  



Alig confidence 
















































.....

























Template Conservation 



 
 

 
                                          


  
  
   
      
    


Template Sequence  VLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAG
Template Known Secondary structure 
TTB

TT
SS
S



SSSS
BGGGS


SSS
BTTBSS

STTSSSBB
TTSS
Template Predicted Secondary structure 
























































Template SS confidence 















































































   109110.........120.........130.........140.........150.........160.........170.........180........
 
   231....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  GVQFD
Query Conservation 




Alig confidence 




Template Conservation 


 
Template Sequence  GFRFD
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 




   189190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions