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Job DescriptionP64426
Confidence99.45%DateThu Jan 5 12:08:13 GMT 2012
Rank15Aligned Residues169
% Identity21%Templatec1ea9D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:cyclomaltodextrinase; PDBTitle: cyclomaltodextrinase
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  QAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVN
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Template Sequence  QGVIDHLDHLSKLGVNAVYFTPLFKA. . . . TTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRT
Template Known Secondary structure  T
TTTTTTT






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SSSTTS
S
TTT

TTT



SB

TT
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   172.......180.........190....... ..200.........210.........220.........230.........240.......
 
   169170.........180.........190.........200.... .....210.........220.........230.......
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Query Sequence  TKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFV. . . . . . . . . . . LDPGIPEVQDWITSIVAEVVSRYPVDGVQFDDY
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Template Sequence  FPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVA
Template Known Secondary structure  STTT
GGGGGB
BSSSS


SSSS
SB
BSSS
TT
BBB
TTST

TTG
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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   238.240.........250.........260.........270.........280.........290.
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Query Sequence  FYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEF
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Template Sequence  NEVS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HQFWREFRRVVKQANPDAYI
Template Known Secondary structure  GGS
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TT
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   328.330. ........340.........350.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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