Job Description P64426 Confidence 99.40% Date Thu Jan 5 12:08:13 GMT 2012 Rank 28 Aligned Residues 167 % Identity 20% Template c1cygA_ PDB info PDB header:glycosyltransferase Chain: A: PDB Molecule:cyclodextrin glucanotransferase; PDBTitle: cyclodextrin glucanotransferase (e.c.2.4.1.19) (cgtase) Resolution 2.50 Å

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		89	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure										.	.																																							.	.	.	.	.	.	.	.	.	.						.	.	.
Query SS confidence										.	.																																							.	.	.	.	.	.	.	.	.	.						.	.	.
Query Sequence		Q	A	M	I	D	K	L	D	.	.	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	.	.	.	.	.	.	.	.	.	.	E	N	P	G	Y	.	.	.	D	P	L	Q	F	M	L	D	E	A	H	K	R	G
Query Conservation										.	.																																							.	.	.	.	.	.	.	.	.	.						.	.	.
Alig confidence										.	.													.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.						.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		Q	G	I	I	N	K	I	N	D	G	Y	L	T	D	M	G	V	T	A	I	W	I	.	.	.	.	.	.	S	Q	P	V	E	N	V	F	S	V	M	N	D	A	S	G	S	A	S	Y	H	G	Y	W	A	R	D	F	K	K	P	N	P	F	F	G	T	L	S	D	F	Q	R	L	V	D	A	A	H	A	K	G
Template Known Secondary structure										T	S	T	T	T	T	T	T							.	.	.	.	.	.												S	S	S	S				S	T	T	S		S									T	T	T																T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																				.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	P	G	I	P	E	V	Q	D
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	V	I	I	D	F	A	P	N	H	T	S	P	A	S	E	T	N	P	S	Y	M	E	N	G	R	L	Y	D	N	G	T	L	L	G	G	Y	T	N	D	A	N	M	Y	F	H	H	N	G	G	T	T	F	S	S	L	E	D	G	I	Y	R	N	L	F	D	L	A	D	L	N	H	Q	N	P	V	I	D	R
Template Known Secondary structure										T	T							S	S		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B				S	S						S	S	B	S	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	T	S	I	V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S	P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G
Query Conservation
Alig confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	K	D	A	V	K	M	W	I	.	D	M	G	I	D	G	I	R	M	D	A	V	K	H	M	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	Q	K	S	L	M	D	E	I	D	N	Y	R	P	V	F	T	F	G
Template Known Secondary structure												.	T	T	T							S		G	G	G	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.																															.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions