Job Description P64426 Confidence 99.41% Date Thu Jan 5 12:08:13 GMT 2012 Rank 23 Aligned Residues 142 % Identity 20% Template c1bf2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:isoamylase; PDBTitle: structure of pseudomonas isoamylase Resolution 2.00 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	A	G	L	K	A	S	Y	L	A	S	L	G	V	T	A	V	E	F	L	P	V	Q	E	T	Q	N	D	A	N	D	V	V	P	N	S	D	A	N	Q	N	Y	W	G	Y	M	T	E	N	Y	F	S	P	D	R	R	Y	A	Y	N	K	A	A	G	G	P	T	A	E	F	Q	A	M	V	Q	A	F	H	N
Template Known Secondary structure							T								T							S			B		B	S		T	T	T	T	S	S	T	T			T	T				S				B	S		S	S		B		G	G	G		S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		152	.	.	.	.													.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	M	K	V	.	.	.	.	.	.	.	.	.	.	.	.	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		A	G	I	K	V	Y	M	D	V	V	Y	N	H	T	A	E	G	G	T	W	T	.	.	.	.	.	S	S	D	P	T	T	A	T	I	Y	S	W	R	G	L	D	N	A	T	Y	Y	E	L	T	S	G	N	Q	Y	F	Y	D	N	T	G	I	G	A	N	F	N	T	Y	N	T	V	A	Q	N	L	I	V	D	S
Template Known Secondary structure		T	T										S	S		T	T		S	B	S	S	.	.	.	.	.	S	S		S	S		B	B		S	S										B		B		T	T	S	S	S	B			S	S	S	S	S			B		T	T	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	V	V	S	R	Y	P	V	D	G	V	Q	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	Y	W	A	N	T	M	G	V	D	G	F	R	F	D
Template Known Secondary structure								T	S								T
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions