Job Description P64426 Confidence 99.24% Date Thu Jan 5 12:08:13 GMT 2012 Rank 80 Aligned Residues 134 % Identity 15% Template c1bagA_ PDB info PDB header:alpha-amylase Chain: A: PDB Molecule:alpha-1,4-glucan-4-glucanohydrolase; PDBTitle: alpha-amylase from bacillus subtilis complexed with2 maltopentaose Resolution 2.50 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.															.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		N	T	L	K	H	N	M	K	D	I	H	D	A	G	Y	T	A	I	Q	T	S	P	I	N	Q	V	K	E	G	N	Q	G	D	K	S	M	S	N	W	Y	W	L	Y	Q	P	T	S	Y	Q	I	G	N	R	Y	L	G	T	E	.	.	.	.	.	.	.	Q	E	F	K	E	M	C	A	A	A	E	E	Y	G	I
Template Known Secondary structure							T							T	T		S					S								T	G	G	G				G	G	G	G	G	G	G	G										T	T	T				.	.	.	.	.	.	.												T	T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		K	V	H	A	W	F	N	P	Y	R	V	S	V	N	T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	.	.	.	.	.	.	.	.	.	W	I	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																														.	.	.	.	.	.	.	.	.																															.
Template Conservation								.	.	.	.	.																																																																					.
Template Sequence		K	V	I	V	D	A	.	.	.	.	.	V	I	N	H	T	T	F	D	Y	A	A	I	S	N	E	V	K	S	I	P	N	W	T	H	G	N	T	Q	I	K	N	W	S	D	R	W	D	V	T	Q	N	S	L	L	G	L	Y	D	W	N	T	Q	N	T	Q	V	Q	S	Y	L	K	R	F	L	E	R	A	L	.
Template Known Secondary structure								.	.	.	.	.			S	B			S		G	G	G	S						T	S	T	T							B				T	T								S	B	S	T	T						T	T																	.
Template Predicted Secondary structure								.	.	.	.	.																																																																					.
Template SS confidence
		93	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	P	V	D	G	V	Q	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	G	A	D	G	F	R	F	D
Template Known Secondary structure				T							T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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