Return to main results Retrieve Phyre Job Id

Job DescriptionP76119
Confidence39.92%DateThu Jan 5 12:19:12 GMT 2012
Rank7Aligned Residues46
% Identity17%Templatec3hefB_
PDB info PDB header:viral proteinChain: B: PDB Molecule:gene 1 protein; PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 














Query SS confidence 






























































Query Sequence  LFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSNIDSLAFEKMFIE
Query Conservation 
 
 
 


 

 
   
  
       
   
    



 






  


  
      
Alig confidence 



















...............














..










Template Conservation    
 
   

 
 

  

 ...............  



  
   
  ..    
 
    
Template Sequence  VADDICSLLSSGESLLKVCK. . . . . . . . . . . . . . . RPGMPDKSTVFRWLA. . KHEDFRDKYAK
Template Known Secondary structure  TT

TT...............STT


..
Template Predicted Secondary structure 

...............




..

Template SS confidence 






























































   17..20.........30...... ...40.........50. ........60..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions