Return to main results Retrieve Phyre Job Id

Job DescriptionP76639
Confidence85.11%DateThu Jan 5 12:25:10 GMT 2012
Rank157Aligned Residues45
% Identity18%Templated1l3la1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution1.66

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80...
Predicted Secondary structure 













Query SS confidence 




















































Query Sequence  YIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFE
Query Conservation   
       
  
            
   

         
   
  

  
 
Alig confidence 

























........


















Template Conservation   

 

  

  
  
 
   

  
........ 

  

      
  


Template Sequence  WLDPKEATYLRWIAVGKTXEEIADVE. . . . . . . . GVKYNSVRVKLREAXKRFD
Template Known Secondary structure 


TTT

........T

T
Template Predicted Secondary structure 






........



Template SS confidence 




















































   173......180.........190........ .200.........210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions