Job Description P76639 Confidence 99.73% Date Thu Jan 5 12:25:10 GMT 2012 Rank 22 Aligned Residues 188 % Identity 8% Template d1dcea1 SCOP info alpha-alpha superhelix Protein prenylyltransferase Protein prenylyltransferase Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		L	A	G	K	K	E	L	Y	D	F	T	P	E	S	I	Y	R	A	M	T	I	F	D	R	L	Q	N	K	S	D	I	Q	T	L	K	T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	.	K	S	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D	G
Query Conservation																																																							.
Alig confidence																													.	.	.																								.
Template Conservation																													.	.	.
Template Sequence		A	T	Q	A	V	F	Q	K	R	Q	A	G	E	L	D	E	S	V	L	E	L	T	S	Q	I	L	G	.	.	.	A	N	P	D	F	A	T	L	W	N	C	R	R	E	V	L	Q	H	L	E	T	E	K	S	P	E	E	S	A	A	L	V	K	A	E	L	G	F	L	E	S	C	L	R	V	N	P	K	S	Y
Template Known Secondary structure												T	T			S													.	.	.			T	T																	T	T	S																								T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																	.	.																																				.
Query SS confidence																	.	.																																				.
Query Sequence		K	I	L	A	I	M	G	L	I	T	G	L	S	G	Q	.	.	A	K	V	S	H	I	L	F	E	Q	A	K	I	H	S	T	D	I	A	S	L	Y	Y	Y	R	A	L	V	H	F	H	N	E	K	I	.	E	E	A	R	I	C	I	D	K	S	L	Q	L	E	P	R	R	R	K	A	V	V	I	K	E	C	V
Query Conservation																	.	.																																				.
Alig confidence																	.	.																																				.																								.
Template Conservation																																																																														.
Template Sequence		G	T	W	H	H	R	C	W	L	L	S	R	L	P	E	P	N	W	A	R	E	L	E	L	C	A	R	F	L	E	A	D	E	R	N	F	H	C	W	D	Y	R	R	F	V	A	A	Q	A	A	V	A	P	A	E	E	L	A	F	T	D	S	L	I	T	R	N	F	S	N	Y	S	S	W	H	Y	.	R	S	C
Template Known Secondary structure													T		S	S																		T	T															T													T	T	T	T	T	T										.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.
		416	.	.	.	420	.	.	.	.	.	.															.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	M	Y	V	P	N	P	L	K	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	L	Y	Y	K	E	T	E	S	E	S	H	R	V	I	I	D	N	I	L	K	L	K	Q
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	P	Q	L	H	P	Q	P	D	S	G	P	Q	G	R	L	P	E	N	V	L	L	K	E	L	E	L	V	Q	N	A	F	F	T	D	P	N	D	Q	S	A	W	F	Y	H	R	W	L	L
Template Known Secondary structure							S					S	S	S			S	S																				S	S		S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions