Job Description P76639 Confidence 99.09% Date Thu Jan 5 12:25:10 GMT 2012 Rank 109 Aligned Residues 187 % Identity 9% Template c3ulqA_ PDB info PDB header:gene regulation/transcription activator Chain: A: PDB Molecule:response regulator aspartate phosphatase f; PDBTitle: crystal structure of the anti-activator rapf complexed with the2 response regulator coma dna binding domain Resolution 2.30 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300										.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																																					.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.																																					.	.
Query Sequence		P	E	S	I	Y	R	A	M	T	I	F	D	R	L	Q	N	K	S	D	I	Q	T	L	K	T	E	C	Y	C	L	.	.	.	.	.	.	.	.	.	L	A	E	C	H	M	S	L	A	L	H	G	K	S	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	.	.	D	G	K
Query Conservation																																.	.	.	.	.	.	.	.	.																																					.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																																					.	.
Template Conservation
Template Sequence		R	F	S	I	P	D	A	E	Y	L	R	R	E	I	K	Q	E	L	D	Q	M	E	E	D	Q	D	L	H	L	Y	Y	S	L	M	E	F	R	H	N	L	M	L	E	Y	L	E	P	L	E	K	M	R	I	E	E	Q	P	R	L	S	D	L	L	L	E	I	D	K	K	Q	A	R	L	T	G	L	L	E	Y	Y
Template Known Secondary structure		T	T																		T	S																									G	G	G	G	G	S		G	G	G	S														T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		I	L	A	I	M	G	L	I	T	G	L	S	G	Q	A	K	V	S	H	I	L	F	E	Q	A	K	I	H	S	T	D	I	A	.	.	.	.	.	.	S	L	Y	Y	Y	R	A	L	V	H	F	H	N	E	K	I	E	E	A	R	I	C	I	D	K	S	L	Q	L	E	P	R	R	R	K	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	F	F	R	G	M	Y	E	L	D	Q	R	E	Y	L	S	A	I	K	F	F	K	K	A	E	S	K	L	I	F	V	K	D	R	I	E	K	A	E	F	F	F	K	M	S	E	S	Y	Y	Y	M	K	Q	T	Y	F	S	M	D	Y	A	R	Q	A	Y	E	I	Y	K	E	H	E	A	Y	N	I	R	L	L
Template Known Secondary structure													T	T														T	T	G	G	G																					T	T																		T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	I	K	E	C	V	D	M	Y	V	P	N	P	L	K	N	N	I	K	L	Y	Y	K	E	T	E	S	E	S	H	R	V	I	I	D	N	I	L	K	L	K	Q	L	T	R	I	C	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	C	H	S	L	F	A	T	N	F	L	D	L	K	Q	Y	E	D	A	I	S	H	F	Q	K	A	Y	S	M	A	E	A	E	K	Q	P	Q	L	M	G	R	T	L	Y	N	I	G	L	C	K
Template Known Secondary structure														T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions