Job Description P76639 Confidence 64.85% Date Thu Jan 5 12:25:10 GMT 2012 Rank 182 Aligned Residues 72 % Identity 29% Template c3snxB_ PDB info
PDB header: sugar binding proteinChain: B: PDB Molecule: putative susd-like carbohydrate binding protein;
PDBTitle: crystal structure of a putative susd-like carbohydrate binding protein2 (bt_1439) from bacteroides thetaiotaomicron vpi-5482 at 1.88 a3 resolution
Resolution 1.88 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
295 . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . .
Predicted Secondary structure
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query SS confidence
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
Query Sequence
T E C Y C L L A E C H M S L A L H G K .
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
S E L E L A A Q K A L E L L D Y V S D I T T V D .
.
.
.
.
.
.
.
.
Query Conservation
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Alig confidence
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Conservation
Template Sequence
G Q A L A L R A F C Y L H L V Q H Y Q F T Y L K D K D A P C V P I Y T E P T T S G T K P K G K S T V A Q V Y Q Q I F D D L N L A Q D Y L T N Y V R K G D G Q K F
Template Known Secondary structure
S T T T T T S S T T T T T S G G G T T
Template Predicted Secondary structure
Template SS confidence
140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . .
338 . 340 . . . . . . . . . 350 . . . . . . . . . 360 . . . . . .
Predicted Secondary structure
. . . .
Query SS confidence
.
.
.
.
Query Sequence
.
.
.
.
G K I L A I M G L I T G L S G Q A K V S H I L F E Q A K I
Query Conservation
. . . .
Alig confidence
. . . .
Template Conservation
Template Sequence
K P N T D V V N G L X A R A Y L L T G Q W G E A A K A A E A A R K
Template Known Secondary structure
S T T T T
Template Predicted Secondary structure
Template SS confidence
220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
