Job Description P76639 Confidence 99.72% Date Thu Jan 5 12:25:10 GMT 2012 Rank 25 Aligned Residues 150 % Identity 8% Template c3q75A_ PDB info PDB header:transferase Chain: A: PDB Molecule:farnesyltransferase alpha subunit; PDBTitle: cryptococcus neoformans protein farnesyltransferase in complex with2 fpt-ii and tkcvvm peptide Resolution 2.14 Å

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		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		Q	T	L	K	T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	S	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D	G	K	I	L	A	I	M	G	L	I	T	G	L	S	G	Q	.	A	K	V	S	H	I	L	F	E	Q	A	K	I	H	S	T
Query Conservation																																																																	.
Alig confidence																							.	.	.	.	.	.	.	.	.																																		.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		S	E	E	Y	K	D	A	M	D	Y	F	R	A	I	A	A	K	E	E	K	S	.	.	.	.	.	.	.	.	.	E	R	A	L	E	L	T	E	I	I	V	R	M	N	P	A	H	Y	T	V	W	Q	Y	R	F	S	L	L	T	S	L	N	K	S	L	E	D	E	L	R	L	M	N	E	F	A	V	Q	N	L
Template Known Secondary structure																			T			S	.	.	.	.	.	.	.	.	.															T	T															T	T																	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.			.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.									.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.																																				.	.	.	.	.	.	.	.
Query Sequence		D	I	A	S	L	Y	Y	Y	R	A	L	V	H	F	H	N	E	K	.	.	I	E	E	A	R	I	C	I	D	K	S	L	Q	L	E	P	R	R	R	K	A	V	V	I	K	E	C	V	D	M	Y	V	P	N	P	.	.	.	.	.	.	.	.	L	K	N	N	I	K	L	Y	Y	K	E	T	E	S	E	S	H
Query Conservation																				.	.																																				.	.	.	.	.	.	.	.
Alig confidence																				.	.																									.											.	.	.	.	.	.	.	.
Template Conservation																																														.
Template Sequence		K	S	Y	Q	V	W	H	H	R	L	L	L	L	D	R	I	S	P	Q	D	P	V	S	E	I	E	Y	I	H	G	S	L	L	P	D	P	K	N	Y	H	T	W	A	Y	.	L	H	W	L	Y	S	H	F	S	T	L	G	R	I	S	E	A	Q	W	G	S	E	L	D	W	C	N	E	M	L	R	V	D	G	R
Template Known Secondary structure		T																		S													T	S	S		T	T								.											T	T																						T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	I	D	N	I	L	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	S	A	W	G	W	R	W	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions