Job Description P76639 Confidence 41.23% Date Thu Jan 5 12:25:10 GMT 2012 Rank 207 Aligned Residues 93 % Identity 22% Template c3myvA_ PDB info PDB header:saccharide binding protein Chain: A: PDB Molecule:susd superfamily protein; PDBTitle: crystal structure of a susd superfamily protein (bvu_0732) from2 bacteroides vulgatus atcc 8482 at 1.80 a resolution Resolution 1.80 Å

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		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.								.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.																													.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	R	A	M	T	I	F	D	R	L	Q	N	K	S	D	I	Q	T	L	.	.	.	.	.	.	.	K	T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	E	L
Query Conservation																						.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	E	A	W	N	I	L	N	A	I	A	E	G	K	I	E	S	G	D	E	K	K	L	N	A	L	K	G	E	T	X	A	V	I	A	L	C	Q	F	D	L	T	R	C	F	G	Y	P	Y	T	K	D	K	G	A	S	L	G	A	P	L	I	D	H	L	V	G	T	Y	E	N	P	P	R	S	T	V	A	Q
Template Known Secondary structure														T	T		S		S	S																												S							T	T		S								S				T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.									.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D	G	.	.	.	.	.	.	.	.	K	I	L	A	I	M	G	L	I	T	G	L	S	G	Q	A	K	V	S	H	I	L	F	E	Q	A	K	I
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	D	F	I	I	E	T	L	E	E	A	V	T	L	X	S	E	E	K	N	N	G	R	X	N	K	Y	A	A	R	A	L	L	A	R	I	Y	L	Y	H	D	D	N	R	K	A	F	D	L	A	D	Q	L	I	K
Template Known Secondary structure																				S			T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions