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Job DescriptionP76639
Confidence93.21%DateThu Jan 5 12:25:10 GMT 2012
Rank141Aligned Residues107
% Identity11%Templatec3mkqB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ELELAAQKALEL. . LDYVSDITT. . VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE
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Template Sequence  DPHIRFDLALEYGNLDAALDEAKKLNDSITWERLIQEALAQGNASLAEMIYQTQ. . . . . . . . HSFDKLSFLYLVTGDVNK
Template Known Secondary structure 
TT


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   648.650.........660.........670.........680.........690.........700. ........710.........
 
   391........400.........410.........420.........430.....
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Query Sequence  ARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETE
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Template Sequence  LSKMQNIAQTRED. . . . . . FGSMLLNTFYNNSTKERSSIFAEGGS
Template Known Secondary structure  TT
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   720.........730.. .......740.........750........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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