Job Description P76639 Confidence 92.10% Date Thu Jan 5 12:25:10 GMT 2012 Rank 144 Aligned Residues 110 % Identity 10% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		327	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.									.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure									.	.																															.	.	.	.	.	.	.	.
Query SS confidence									.	.																															.	.	.	.	.	.	.	.
Query Sequence		L	D	Y	V	S	D	I	.	.	T	T	V	D	G	K	I	L	A	I	M	G	L	I	T	G	L	S	G	Q	A	K	V	S	H	I	L	F	E	Q	.	.	.	.	.	.	.	.	A	K	I	H	S	T	D	I	A	S	L	Y	Y	Y	R	A	L	V	H	F	H	N	E	K	I	E	E	A	R	I	C	I	D
Query Conservation									.	.																															.	.	.	.	.	.	.	.
Alig confidence									.	.																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	L	A	R	D	L	L	T	D	E	S	A	E	M	K	W	R	A	L	G	D	A	S	L	Q	R	F	N	F	K	L	A	I	E	A	F	T	N	A	H	D	L	E	S	L	F	L	L	H	S	S	F	N	N	K	E	G	L	V	T	L	A	K	D	A	E	T	T	G	K	F	N	L	A	F	N	A	Y	W
Template Known Secondary structure										T	T																	T	T													T												T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	Q	L	E	P	R	R	R	K	A	V	V	I	K	E	C	V	D	M	Y	V	P	N	P	L	K	N	N	I	K	L	Y	Y	K	E	T	E	S	E	S	H	R	V	I	I	D	N	I	L	K
Query Conservation
Alig confidence				.	.	.	.	.										.	.	.	.																.	.	.
Template Conservation				.	.	.	.	.										.	.	.	.																.	.	.
Template Sequence		I	A	.	.	.	.	.	G	D	I	Q	G	A	K	D	L	.	.	.	.	L	I	K	S	Q	R	F	S	E	A	A	F	L	G	S	.	.	.	T	Y	G	L	G	D	N	E	V	N	D	I	V	T
Template Known Secondary structure				.	.	.	.	.	T									.	.	.	.				T	T											.	.	.		T	T
Template Predicted Secondary structure				.	.	.	.	.										.	.	.	.																.	.	.
Template SS confidence
		748	.						750	.	.	.	.	.	.	.	.					.	760	.	.	.	.	.	.	.	.	.	770	.	.	.				.	.	.	.	.	.	780	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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