Job Description P76639 Confidence 50.86% Date Thu Jan 5 12:25:10 GMT 2012 Rank 197 Aligned Residues 72 % Identity 14% Template c3kezB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:putative sugar binding protein; PDBTitle: crystal structure of putative sugar binding protein (yp_001299726.1)2 from bacteroides vulgatus atcc 8482 at 1.90 a resolution Resolution 1.90 Å

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		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.																													.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D	G	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Q	A	L	A	I	R	G	X	A	L	F	D	L	T	R	I	F	G	Y	P	Y	L	K	D	N	G	A	S	L	G	V	P	I	V	K	E	L	S	T	I	D	S	K	P	A	R	N	T	V	A	E	C	Y	T	E	I	I	S	D	L	K	N	S	T	E	L	L	S	G	D	F	N	K	G	K	V	N	R	W
Template Known Secondary structure																				S							T	T		S	B							S				T	T							B																			S			S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	A	I	M	G	L	I	T	G	L	S	G	Q	A	K	V	S	H	I	L	F	E	Q	A	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	X	T	L	L	S	R	V	Y	L	Y	K	G	E	Y	N	E	A	L	T	X	A	E	N	A	I	K
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions