Job Description P76639 Confidence 29.05% Date Thu Jan 5 12:25:10 GMT 2012 Rank 228 Aligned Residues 71 % Identity 25% Template c3jq1A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:susd superfamily protein; PDBTitle: crystal structure of susd superfamily protein (yp_001297730.1) from2 bacteroides vulgatus atcc 8482 at 1.55 a resolution Resolution 1.55 Å

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		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.									.	340	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D	G	.	.	.	.	.	.	.	.	K	I	L	A	I	M	G	L	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	C	L	F	I	R	G	F	Y	L	F	Q	L	A	K	E	F	K	D	A	P	L	R	L	T	A	S	Q	S	P	S	T	F	P	L	A	K	S	S	Q	A	D	I	W	A	Q	A	K	E	D	L	K	T	A	A	S	L	L	P	I	T	N	K	I	G	K	P	T	Q	G	A	A	Y	A	A	L	G	K	I
Template Known Secondary structure																				S	S									S	S				S																									S		S	S		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	L	S	G	Q	A	K	V	S	H	I	L	F	E	Q	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	Y	E	E	N	W	Q	E	A	I	N	V	L	E	P	L	T
Template Known Secondary structure					T	T										G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions