Job Description P76639 Confidence 99.70% Date Thu Jan 5 12:25:10 GMT 2012 Rank 29 Aligned Residues 177 % Identity 14% Template c3hymB_ PDB info PDB header:cell cycle, ligase Chain: B: PDB Molecule:cell division cycle protein 16 homolog; PDBTitle: insights into anaphase promoting complex tpr subdomain2 assembly from a cdc26-apc6 structure Resolution 2.80 Å

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		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	L	A	G	K	K	E	L	Y	D	F	T	P	E	S	I	Y	R	A	M	T	I	F	D	R	L	Q	N	K	S	D	I	Q	T	L	K	T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	S	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D
Query Conservation
Alig confidence													.	.	.																.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		V	V	S	L	A	E	R	H	Y	Y	N	.	.	.	C	D	F	K	X	C	Y	K	L	T	S	V	V	X	E	.	.	.	K	D	P	F	H	A	S	C	L	P	V	H	I	G	T	L	V	E	L	N	K	A	.	.	.	.	.	.	.	.	.	N	E	L	F	Y	L	S	H	K	L	V	D	L	Y	P	S	N
Template Known Secondary structure												T	.	.	.	T															.	.	.			T	T		T	T	T												T			.	.	.	.	.	.	.	.	.															T	T	S
Template Predicted Secondary structure													.	.	.																.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.										.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	I	L	A	I	M	G	L	I	T	G	L	S	G	Q	.	A	K	V	S	H	I	L	F	E	Q	A	K	I	H	S	T	D	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	S	W	F	A	V	G	C	Y	Y	L	X	V	G	H	K	N	E	H	A	R	R	Y	L	S	K	A	T	T	L	E	K	T	Y	G	P	A	W	I	A	Y	G	H	S	F	A	V	E	S	E	H	D	Q	A	X	A	A	Y	F	T	A	A	Q	L	X	K	G	C	H	L	P	X	L	Y	I	G	L	E	Y
Template Known Secondary structure		T													S		S														T	T		T	T		T														T																T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
																																																																						374	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	Y	Y	R	A	L	V	H	F	H	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	N	N	S	K	L	A	E	R	F	F	S	Q	A	L	S	I	A	P	E	D	P	F	V	X	H	E	V	G	V	V	A	F	Q	N	G	E	W	K	T	A	E	K	W	F	L	D	A	L	E	K	I	K	A	I	G	N	E	V	T	V	D	K	W	E	P	L	L	N	N	L	G	H	V	C	R	K	L
Template Known Secondary structure				T	T														T	T		T	T															T	T																	T	T	T	S		S		T	T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	E	E	A	R	I	C	I	D	K	S	L	Q	L	E	P	R	R	R	K	A	V	V	I	K	E	C	V	D	M	Y	V	P	N	P	L	K	N	N	I	K	L	Y	Y	K	E	T	E	S	E	S	H	R	V	I	I	D	N	I	L	K	L	K
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		K	K	Y	A	E	A	L	D	Y	H	R	Q	A	L	V	L	I	P	Q	N	A	S	T	Y	S	A	.	I	G	Y	I	H	S	L	X	G	N	F	E	N	A	V	D	Y	F	H	T	A	L	G	L	R	R	D	D	T	F	S	V	T	X	L	G	H	C
Template Known Secondary structure		T																S	T	T		S						.									T											T	T	T	T	T		S
Template Predicted Secondary structure																												.
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions